CDS
| Accession Number | TCMCG007C21583 |
| gbkey | CDS |
| Protein Id | XP_009135387.1 |
| Location | complement(join(18041212..18041802,18042086..18042571)) |
| Gene | LOC103859579 |
| GeneID | 103859579 |
| Organism | Brassica rapa |
Protein
| Length | 358aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA249065 |
| db_source | XM_009137139.3 |
| Definition | putative geranylgeranyl pyrophosphate synthase 8, chloroplastic [Brassica rapa] |
EGGNOG-MAPPER Annotation
| COG_category | H |
| Description | Belongs to the FPP GGPP synthase family |
| KEGG_TC | - |
| KEGG_Module |
M00364
[VIEW IN KEGG] M00366 [VIEW IN KEGG] |
| KEGG_Reaction |
R01658
[VIEW IN KEGG] R02003 [VIEW IN KEGG] R02061 [VIEW IN KEGG] |
| KEGG_rclass |
RC00279
[VIEW IN KEGG] |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko01006 [VIEW IN KEGG] |
| KEGG_ko |
ko:K13789
[VIEW IN KEGG] |
| EC |
2.5.1.1
[VIEW IN KEGG]
[VIEW IN INGREDIENT] 2.5.1.10 [VIEW IN KEGG] [VIEW IN INGREDIENT] 2.5.1.29 [VIEW IN KEGG] [VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00900
[VIEW IN KEGG] ko01100 [VIEW IN KEGG] ko01110 [VIEW IN KEGG] ko01130 [VIEW IN KEGG] map00900 [VIEW IN KEGG] map01100 [VIEW IN KEGG] map01110 [VIEW IN KEGG] map01130 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGAACACTGTGAATCTCAGCTTCTCCTTCCTCTTCATCCAATCCAAAGGAAGACGATACAACTCCATATCCTCCGTCAAGAGTCCCCCAAAACGCACTGTTTTATCTCTCTCGTCCGCTGTCACCTCACGAAGCGGAGACATGATTACACCAGAAGGGAAACGCAATGATCACAGCTCCACCTTTGACTTCAAGTCGTATATGATCGGTAAAGCCGAATCTGTAAACGCGGCTCTCGATGTTTCCTTACCGCTTTTGAAACCTCTAACGATCCAAGAGGCGGTGCGGTACTCACTGCTAGCTGGCGGAAAACGTGTGAGATCTCTGCTCTGCATTGCTGCATGTGAGCTTGTGGGTGGCGACGAGGCTATTGCCATGTCAGCCGCTTGTGCGGTCGAGATGATCCACACGAGCTCTCTTATCCATGACGACCTTCCATGCATGGACAATGCTGACCTCCGCAGAGGCAAGCCTACCAACCACAAGGTATTTGGAGAAGCTATGGCGGTTTTGGCAGGTGATGCACTCCTTTCTTTGGCGTTTGAGCATATGACCGTCATGTCGAGTGGGTTGATCGCCCCAGAGAGGATGATCCATGCTGTGATTGAGCTTGCAAAGGCCATTGGGACAAAAGGGCTAGTGGCTGGGCAAGTGGTTGACCTACGAAGCCAAGGGTTGAATCCGGACGACGTCGGATTGGACCGCCTAGAGTTCATTCACCTCCACAAAACAGCGGCTTTGTTGGAGGCAGCGACGGTTATAGGAGCCATAATGGGAGGTGGCACAGAGGAAGAGATCGACAAGCTTAGAAAGTATGCCAGATGCATTGGCCTTTTGTTTCAAGTGGTTGATGATATTCTTGACGTGACGAAATCTTCCGAGGAATTGGGTAAGAACGCCGGACAAGACGTTATCACCGGAAAAGTGACGTATCCGAGGCTGATTGGTTTGGAGAAATCGAGGGAACTTGCGGAGAAATTGAGCAGAGAAGCAGAGGAACAGCTTCTAGGGTTTGATTCTGATAAGGCGGCTCCTCTAGTGGCTCTGGCTAGCTACATTGCATGTAGAAACAATTGA |
| Protein: MNTVNLSFSFLFIQSKGRRYNSISSVKSPPKRTVLSLSSAVTSRSGDMITPEGKRNDHSSTFDFKSYMIGKAESVNAALDVSLPLLKPLTIQEAVRYSLLAGGKRVRSLLCIAACELVGGDEAIAMSAACAVEMIHTSSLIHDDLPCMDNADLRRGKPTNHKVFGEAMAVLAGDALLSLAFEHMTVMSSGLIAPERMIHAVIELAKAIGTKGLVAGQVVDLRSQGLNPDDVGLDRLEFIHLHKTAALLEAATVIGAIMGGGTEEEIDKLRKYARCIGLLFQVVDDILDVTKSSEELGKNAGQDVITGKVTYPRLIGLEKSRELAEKLSREAEEQLLGFDSDKAAPLVALASYIACRNN |